STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_00820Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (982 aa)    
Predicted Functional Partners:
B0A48_04084
Uncharacterized protein.
 
 
 0.980
B0A48_06725
Uncharacterized protein.
 
 
 0.978
B0A48_15594
Uncharacterized protein.
   
 0.873
B0A48_15403
Uncharacterized protein.
   
 0.873
B0A48_07156
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.814
B0A48_05797
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.814
B0A48_18373
Calnexin.
    
 0.783
B0A48_18117
Calnexin.
    
 0.783
B0A48_10462
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 
 0.609
B0A48_12639
Protein disulfide-isomerase.
   
 0.592
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.