STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_00832Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family. (601 aa)    
Predicted Functional Partners:
B0A48_14988
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.807
B0A48_03260
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.807
B0A48_00981
Uncharacterized protein.
     
 0.792
B0A48_00481
Uncharacterized protein.
     
 0.792
B0A48_18187
Neutral ceramidase.
     
 0.785
B0A48_16833
Neutral ceramidase.
     
 0.785
B0A48_11330
Lipid_DES domain-containing protein.
     
 0.756
B0A48_08994
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
     
 0.756
B0A48_00962
Uncharacterized protein.
   
 0.565
B0A48_01017
NAAA-beta domain-containing protein.
   
 0.565
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.