STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_00451Uncharacterized protein. (468 aa)    
Predicted Functional Partners:
B0A48_02525
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.710
B0A48_13700
SH3 domain-containing protein.
    
 0.694
B0A48_11954
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.665
B0A48_09066
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.665
B0A48_01126
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.665
B0A48_00319
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.665
B0A48_10925
TPR_REGION domain-containing protein.
     
 0.655
B0A48_08790
TPR_REGION domain-containing protein.
     
 0.655
B0A48_16393
Pex2_Pex12 domain-containing protein.
    
 0.640
B0A48_05049
Pex2_Pex12 domain-containing protein.
    
 0.640
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.