B0A48_00483 protein (Rachicladosporium antarcticum)

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second shell of interactors

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filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

B0A48_00483

Uncharacterized protein. (554 aa)

Predicted Functional Partners:

B0A48_05683

0.878

B0A48_14786

0.777

B0A48_14170

0.777

B0A48_16145

0.742

B0A48_15962

0.742

B0A48_10278

0.742

B0A48_09641

0.742

B0A48_16771

0.688

B0A48_14309

0.688

B0A48_04257

0.682

Your Current Organism:

Rachicladosporium antarcticum

NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A48_00483	B0A48_04257	A0A1V8TUZ6	A0A1V8T5J8	Uncharacterized protein.	Actin-related protein 2; Belongs to the actin family.	0.682
B0A48_00483	B0A48_05683	A0A1V8TUZ6	A0A1V8TBL6	Uncharacterized protein.	Uncharacterized protein.	0.878
B0A48_00483	B0A48_09641	A0A1V8TUZ6	A0A1V8T0H3	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.742
B0A48_00483	B0A48_10278	A0A1V8TUZ6	A0A1V8SWS8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.742
B0A48_00483	B0A48_14170	A0A1V8TUZ6	A0A1V8SLC7	Uncharacterized protein.	Ras-related protein Rab-11B.	0.777
B0A48_00483	B0A48_14309	A0A1V8TUZ6	A0A1V8SJL5	Uncharacterized protein.	Serine/threonine-protein kinase.	0.688
B0A48_00483	B0A48_14786	A0A1V8TUZ6	A0A1V8SKF1	Uncharacterized protein.	Ras-related protein Rab-11B.	0.777
B0A48_00483	B0A48_15962	A0A1V8TUZ6	A0A1V8SGM5	Uncharacterized protein.	Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.	0.742
B0A48_00483	B0A48_16145	A0A1V8TUZ6	A0A1V8SFC1	Uncharacterized protein.	Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.	0.742
B0A48_00483	B0A48_16771	A0A1V8TUZ6	A0A1V8SDU4	Uncharacterized protein.	Serine/threonine-protein kinase.	0.688
B0A48_04257	B0A48_00483	A0A1V8T5J8	A0A1V8TUZ6	Actin-related protein 2; Belongs to the actin family.	Uncharacterized protein.	0.682
B0A48_04257	B0A48_05683	A0A1V8T5J8	A0A1V8TBL6	Actin-related protein 2; Belongs to the actin family.	Uncharacterized protein.	0.910
B0A48_04257	B0A48_09641	A0A1V8T5J8	A0A1V8T0H3	Actin-related protein 2; Belongs to the actin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.825
B0A48_04257	B0A48_10278	A0A1V8T5J8	A0A1V8SWS8	Actin-related protein 2; Belongs to the actin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.825
B0A48_04257	B0A48_14170	A0A1V8T5J8	A0A1V8SLC7	Actin-related protein 2; Belongs to the actin family.	Ras-related protein Rab-11B.	0.628
B0A48_04257	B0A48_14309	A0A1V8T5J8	A0A1V8SJL5	Actin-related protein 2; Belongs to the actin family.	Serine/threonine-protein kinase.	0.622
B0A48_04257	B0A48_14786	A0A1V8T5J8	A0A1V8SKF1	Actin-related protein 2; Belongs to the actin family.	Ras-related protein Rab-11B.	0.628
B0A48_04257	B0A48_16771	A0A1V8T5J8	A0A1V8SDU4	Actin-related protein 2; Belongs to the actin family.	Serine/threonine-protein kinase.	0.622
B0A48_05683	B0A48_00483	A0A1V8TBL6	A0A1V8TUZ6	Uncharacterized protein.	Uncharacterized protein.	0.878
B0A48_05683	B0A48_04257	A0A1V8TBL6	A0A1V8T5J8	Uncharacterized protein.	Actin-related protein 2; Belongs to the actin family.	0.910

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

33

average node degree:

6

avg. local clustering coefficient:

0.936

expected number of edges:

52

PPI enrichment p-value:

0.997

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006412

Translation

7 of 392

1.63

2.47

1.99e-07

GO:0042128

Nitrate assimilation

2 of 16

2.48

1.26

0.0049

GO:0006807

Nitrogen compound metabolic process

9 of 5018

0.63

0.48

0.0031

GO:0044237

Cellular metabolic process

9 of 5407

0.6

0.44

0.0049

GO:0071704

Organic substance metabolic process

9 of 6797

0.5

0.34

0.0253

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003735

Structural constituent of ribosome

7 of 209

1.9

3.64

1.23e-09

GO:0050464

Nitrate reductase (NADPH) activity

2 of 2

3.38

1.82

0.00053

GO:0043546

Molybdopterin cofactor binding

2 of 5

2.98

1.74

0.00070

GO:0070181

Small ribosomal subunit rRNA binding

2 of 6

2.9

1.7

0.00083

GO:0019843

rRNA binding

3 of 54

2.12

1.69

0.00053

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005763

Mitochondrial small ribosomal subunit

7 of 27

2.79

7.8

8.27e-16

GO:0110165

Cellular anatomical entity

11 of 13713

0.28

0.23

0.0349

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:10412

Organellar ribosome, and Nucleoside diphosphate kinase-like domain

7 of 67

2.4

5.8

9.30e-13

CL:10424

Organellar large ribosomal subunit, and Organellar small ribosomal subunit

4 of 28

2.53

3.58

1.47e-07

CL:10505

Mixed, incl. Small ribosomal subunit rRNA binding, and Ribosomal protein S5

3 of 7

3.01

3.23

1.27e-06

CL:10427

Organellar large ribosomal subunit, and 5S rRNA binding

3 of 21

2.53

2.51

2.00e-05

CL:18134

Nitrate reductase activity, and Sterol desaturase Scs7

2 of 5

2.98

1.8

0.00054

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03010

Ribosome

6 of 246

1.77

2.89

4.90e-08

map00910

Nitrogen metabolism

2 of 84

1.76

0.71

0.0433

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-72766

Translation

7 of 413

1.61

2.52

7.47e-08

MAP-392499

Metabolism of proteins

7 of 1640

1.01

0.9

0.00047

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005763

Mitochondrial small ribosomal subunit

7 of 31

2.73

7.49

2.46e-15

GOCC:0110165

Cellular anatomical entity

11 of 12503

0.32

0.26

0.0160

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0689

Ribosomal protein

3 of 117

1.79

1.21

0.0036

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03404

Mo-co oxidoreductase dimerisation domain

2 of 4

3.08

1.37

0.0034

PF00174

Oxidoreductase molybdopterin binding domain

2 of 4

3.08

1.37

0.0034

PF00970

Oxidoreductase FAD-binding domain

2 of 7

2.83

1.36

0.0034

PF00175

Oxidoreductase NAD-binding domain

2 of 21

2.36

1.01

0.0141

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036374

Oxidoreductase, molybdopterin-binding domain superfamily

2 of 4

3.08

1.14

0.0089

IPR008335

Eukaryotic molybdopterin oxidoreductase

2 of 4

3.08

1.14

0.0089

IPR005066

Moybdenum cofactor oxidoreductase, dimerisation

2 of 4

3.08

1.14

0.0089

IPR000572

Oxidoreductase, molybdopterin-binding domain

2 of 4

3.08

1.14

0.0089

IPR008333

Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain

2 of 7

2.83

1.13

0.0089

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM01117

Cytochrome b5-like Heme/Steroid binding domain

2 of 25

2.28

0.91

0.0208

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