STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMA_03750Hypothetical protein. (216 aa)    
Predicted Functional Partners:
JMA_35590
Tungsten formylmethanofuran dehydrogenase subunit C.
 
    0.687
JMA_05620
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.610
JMA_12550
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.595
JMA_11610
3-ketoacyl-ACP reductase.
 
    0.581
JMA_27970
3-oxoacyl-ACP reductase.
 
    0.572
JMA_02530
3-ketoacyl-ACP reductase.
 
    0.539
JMA_08900
Gluconate 2-dehydrogenase.
 
    0.537
JMA_03730
Hypothetical protein.
       0.528
JMA_03740
Hypothetical protein.
       0.528
JMA_17470
Hypothetical protein.
 
    0.509
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.