STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMA_13900LacI family transcription regulator. (344 aa)    
Predicted Functional Partners:
JMA_13890
Hypothetical protein.
 
  
 0.757
JMA_34190
Hypothetical protein.
    
 
 0.726
JMA_13870
Arabinogalactan ABC transporter permease.
 
     0.519
JMA_13880
Arabinogalactan ABC transporter permease.
     
 0.471
JMA_30930
PTS fructose transporter subunit IIC.
     
 0.459
JMA_13860
ABC transporter substrate-binding protein.
 
  
 0.450
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.