STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMA_19000Hypothetical protein. (250 aa)    
Predicted Functional Partners:
JMA_18990
Hypothetical protein.
 
     0.947
JMA_18980
Hypothetical protein.
 
     0.920
JMA_18970
Hypothetical protein.
 
   
 0.873
JMA_04350
FAD-dependent oxidoreductase.
 
   
 0.736
JMA_14570
Peptidase.
  
     0.680
JMA_13810
Phytoene synthase.
 
   
 0.675
JMA_07510
Phytoene desaturase.
 
   
 0.626
JMA_13790
Phytoene desaturase.
 
   
 0.569
JMA_13800
Capsular polysaccharide biosynthesis protein CpsH.
 
   
 0.565
murG
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
       0.557
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.