STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMA_20700Polar amino acid ABC transporter inner membrane subunit. (217 aa)    
Predicted Functional Partners:
JMA_20690
ABC transporter.
 0.999
JMA_20710
ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.999
JMA_05660
Arginine ABC transporter ATP-binding protein.
 
 0.991
JMA_07640
Arginine ABC transporter ATP-binding protein.
 
 0.990
JMA_07620
Hypothetical protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.983
JMA_05640
ABC transporter substrate-binding protein.
 
 0.982
JMA_07080
ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.975
argH
Argininosuccinate lyase.
  
  
 0.681
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.679
argJ
N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
  
    0.598
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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