STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMA_28090Histidine kinase. (584 aa)    
Predicted Functional Partners:
JMA_28080
Chemotaxis protein CheY.
 
 0.995
JMA_09410
Hypothetical protein.
 
 0.969
JMA_09400
Hypothetical protein.
  
  
 
0.929
JMA_07470
Hypothetical protein.
 
  
 0.837
JMA_28070
ABC transporter substrate-binding protein.
 
   
 0.801
JMA_33070
Protein: sugar ABC-type transporter, substrate-binding protein/ transcriptional regulator, lacI family.
 
 
 0.736
JMA_28030
Hypothetical protein.
 
    0.719
JMA_31010
Iron deficiency-induced protein A.
   
   0.663
JMA_03420
Hypothetical protein.
 
  
 0.495
JMA_28100
Hypothetical protein.
 
     0.477
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.