STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMA_32400Hypothetical protein. (160 aa)    
Predicted Functional Partners:
JMA_08330
Serine/threonine protein kinase.
 
 
 0.904
JMA_08380
Phosphoserine phosphatase.
 
 
 0.897
JMA_10950
Histidine kinase.
 
    0.775
JMA_08320
Antagonist of RsbT.
  
     0.774
JMA_16910
Flagellar motor switch protein FliN.
  
   0.731
JMA_11910
Hypothetical protein.
  
     0.724
JMA_08340
Phosphoserine phosphatase.
 
 
 0.651
rsbW
Serine-protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
  
 
 0.599
JMA_16790
Flagellar motor switch protein FliG.
  
   0.572
JMA_16870
Flagellar hook protein.
   
    0.535
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.