STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMA_33640Hypothetical protein. (330 aa)    
Predicted Functional Partners:
JMA_33650
Hypothetical protein.
 
     0.764
JMA_33660
Hypothetical protein.
       0.680
JMA_33670
Hypothetical protein.
       0.666
JMA_33680
Hypothetical protein.
       0.666
JMA_33690
Hypothetical protein.
       0.666
JMA_20110
Hypothetical protein.
  
     0.559
JMA_33720
Hypothetical protein.
 
     0.538
JMA_33730
Hypothetical protein.
 
     0.507
JMA_33970
Capsular polysaccharide biosynthesis protein.
 
     0.488
JMA_33700
Hypothetical protein.
       0.483
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.