STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV67_00630Biotin biosynthesis protein BioC; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
GV67_00620
Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
GV67_00625
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
  
 0.681
GV67_24265
Biotin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.605
GV67_00615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.570
GV67_07035
methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.419
GV67_24035
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
     0.410
GV67_21140
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.403
Your Current Organism:
Pseudorhizobium pelagicum
NCBI taxonomy Id: 1509405
Other names: CECT 8629, LMG 28314, LMG:28314, P. pelagicum, Pseudorhizobium pelagicum Kimes et al. 2017, Rhizobium sp. R1-200B4, Rhizobium sp. R2-400B4, strain R1-200B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.