STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV67_24075Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)    
Predicted Functional Partners:
GV67_23745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
GV67_06505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
GV67_07170
Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
     0.657
GV67_03810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.623
GV67_05990
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.604
GV67_05325
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.585
GV67_12275
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.585
GV67_19600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
GV67_06795
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
GV67_24080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.539
Your Current Organism:
Pseudorhizobium pelagicum
NCBI taxonomy Id: 1509405
Other names: CECT 8629, LMG 28314, LMG:28314, P. pelagicum, Pseudorhizobium pelagicum Kimes et al. 2017, Rhizobium sp. R1-200B4, Rhizobium sp. R2-400B4, strain R1-200B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.