STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001558155_01759Unannotated protein. (178 aa)    
Predicted Functional Partners:
GCA_001558155_01755
Unannotated protein.
 
     0.950
GCA_001558155_01757
Unannotated protein.
 
     0.950
GCA_001558155_01758
Unannotated protein.
 
     0.950
GCA_001558155_01760
Unannotated protein.
 
     0.910
GCA_001558155_01756
Unannotated protein.
 
     0.905
GCA_001558155_04224
Unannotated protein.
  
 
 0.819
GCA_001558155_04222
Unannotated protein.
  
 
 0.814
GCA_001558155_04220
Unannotated protein.
  
  
 0.630
GCA_001558155_00738
Unannotated protein.
  
    0.495
GCA_001558155_01754
Unannotated protein.
       0.495
Your Current Organism:
Pseudoruegeria sabulilitoris
NCBI taxonomy Id: 1510458
Other names: KCTC 42111, NBRC 110380, P. sabulilitoris, Pseudoruegeria sabulilitoris Park et al. 2014, Pseudoruegeria sp. GJMS-35, strain GJMS-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.