STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001558155_01784Unannotated protein. (181 aa)    
Predicted Functional Partners:
GCA_001558155_03630
Unannotated protein.
  
     0.671
GCA_001558155_03631
Unannotated protein.
 
     0.629
GCA_001558155_02217
Unannotated protein.
   
 0.564
GCA_001558155_04776
Unannotated protein.
   
 0.564
GCA_001558155_01783
Unannotated protein.
  
    0.515
GCA_001558155_03592
Unannotated protein.
  
 
 0.514
GCA_001558155_03632
Unannotated protein.
  
     0.501
GCA_001558155_01834
Unannotated protein.
  
     0.483
GCA_001558155_04924
Unannotated protein.
   
 0.471
GCA_001558155_01222
Unannotated protein.
    
 
 0.470
Your Current Organism:
Pseudoruegeria sabulilitoris
NCBI taxonomy Id: 1510458
Other names: KCTC 42111, NBRC 110380, P. sabulilitoris, Pseudoruegeria sabulilitoris Park et al. 2014, Pseudoruegeria sp. GJMS-35, strain GJMS-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.