STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001558155_02220Unannotated protein. (365 aa)    
Predicted Functional Partners:
GCA_001558155_00164
Unannotated protein.
   
 0.828
GCA_001558155_00933
Unannotated protein.
    
 0.713
GCA_001558155_01554
Unannotated protein.
  
 
  0.710
GCA_001558155_00532
Unannotated protein.
   
 0.642
GCA_001558155_00690
Unannotated protein.
   
 0.642
GCA_001558155_01120
Unannotated protein.
   
 0.642
GCA_001558155_02007
Unannotated protein.
   
 0.642
GCA_001558155_03737
Unannotated protein.
   
 0.642
GCA_001558155_03741
Unannotated protein.
   
 0.642
GCA_001558155_04216
Unannotated protein.
   
 0.642
Your Current Organism:
Pseudoruegeria sabulilitoris
NCBI taxonomy Id: 1510458
Other names: KCTC 42111, NBRC 110380, P. sabulilitoris, Pseudoruegeria sabulilitoris Park et al. 2014, Pseudoruegeria sp. GJMS-35, strain GJMS-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.