STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001558155_03730Unannotated protein. (353 aa)    
Predicted Functional Partners:
GCA_001558155_03729
Unannotated protein.
 
    
0.757
GCA_001558155_03913
Unannotated protein.
 
     0.698
GCA_001558155_03908
Unannotated protein.
 
     0.695
GCA_001558155_03659
Unannotated protein.
  
     0.539
GCA_001558155_04245
Unannotated protein.
  
     0.524
GCA_001558155_02256
Unannotated protein.
  
     0.519
GCA_001558155_04247
Unannotated protein.
  
     0.517
GCA_001558155_03662
Unannotated protein.
  
     0.516
GCA_001558155_03660
Unannotated protein.
  
     0.512
GCA_001558155_02257
Unannotated protein.
  
     0.504
Your Current Organism:
Pseudoruegeria sabulilitoris
NCBI taxonomy Id: 1510458
Other names: KCTC 42111, NBRC 110380, P. sabulilitoris, Pseudoruegeria sabulilitoris Park et al. 2014, Pseudoruegeria sp. GJMS-35, strain GJMS-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.