STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJZ02307.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
KJY98478.1
Diadenosine tetraphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.933
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 0.877
KJZ01738.1
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
   0.851
KJZ00404.1
Metallophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.828
KJY94878.1
Calmodulin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.823
KJY94879.1
Calmodulin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.823
KJY95980.1
Vegetatible incompatibility protein HET-E-1; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.789
KJZ00301.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.761
KJY99851.1
Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.761
KJZ00578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.737
Your Current Organism:
Pseudoalteromonas ruthenica
NCBI taxonomy Id: 151081
Other names: CIP 106857, KMM 300, LMG 19699, LMG:19699, P. ruthenica, Pseudoalteromonas ruthenica Ivanova et al. 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.