STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASQ42_04115Unannotated protein. (217 aa)    
Predicted Functional Partners:
ASQ42_04110
Unannotated protein.
    
  0.798
ASQ42_04120
Unannotated protein.
       0.746
ASQ42_01290
Unannotated protein.
  
     0.701
ASQ42_05025
Unannotated protein.
    
  0.630
ASQ42_06355
Unannotated protein.
  
     0.625
ASQ42_00790
Unannotated protein.
 
     0.618
ASQ42_01305
Unannotated protein.
  
     0.609
ASQ42_04505
Unannotated protein.
  
     0.600
ASQ42_04875
Unannotated protein.
  
     0.588
ASQ42_02195
Unannotated protein.
  
     0.564
Your Current Organism:
Parasaccharibacter apium
NCBI taxonomy Id: 1510841
Other names: ATCC SD-6836, Acetobacteraceae bacterium A29, Acetobacteraceae bacterium B8, Acetobacteraceae bacterium C6, P. apium, strain A29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.