STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASQ42_02195Unannotated protein. (212 aa)    
Predicted Functional Partners:
ASQ42_02200
Unannotated protein.
 
  
  0.970
ASQ42_00045
Unannotated protein.
  
 
 0.955
ASQ42_02190
Unannotated protein.
 
  
  0.947
bioD
Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
 
     0.914
ASQ42_02205
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.842
ASQ42_03730
Unannotated protein.
    
  0.841
ASQ42_03600
Unannotated protein.
 
  
 0.741
ASQ42_03725
Unannotated protein.
  
 
 0.698
ASQ42_08235
Unannotated protein.
   
 
 0.650
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.650
Your Current Organism:
Parasaccharibacter apium
NCBI taxonomy Id: 1510841
Other names: ATCC SD-6836, Acetobacteraceae bacterium A29, Acetobacteraceae bacterium B8, Acetobacteraceae bacterium C6, P. apium, strain A29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.