STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASQ42_03940Unannotated protein. (218 aa)    
Predicted Functional Partners:
ASQ42_01125
Unannotated protein.
    
  0.783
ASQ42_03945
Unannotated protein.
       0.773
ASQ42_07670
Unannotated protein.
  
     0.759
ASQ42_01495
Unannotated protein.
  
     0.715
ASQ42_04875
Unannotated protein.
  
     0.705
GCA_002079945_00904
Unannotated protein.
    
  0.665
ASQ42_06175
Unannotated protein.
 
  
  0.660
ASQ42_04735
Unannotated protein.
  
     0.649
ASQ42_00840
Unannotated protein.
  
   
 0.628
ASQ42_08285
Unannotated protein.
  
     0.628
Your Current Organism:
Parasaccharibacter apium
NCBI taxonomy Id: 1510841
Other names: ATCC SD-6836, Acetobacteraceae bacterium A29, Acetobacteraceae bacterium B8, Acetobacteraceae bacterium C6, P. apium, strain A29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.