STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20155.1Putative Abortive infection protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (275 aa)    
Predicted Functional Partners:
CBH22484.1
S-layer protein/ peptidoglycan endo-beta-N-acetylglucosaminidase, putative (modular protein).
    
   0.732
CBH20154.1
Peptidase M20.
       0.648
CBH20153.1
Protein of unknown function; No homology to any previously reported sequences.
       0.566
CBH20552.1
Homologs of previously reported genes of unknown function.
  
  
 0.476
CBH21752.1
ABC-2 type transporter precursor.
  
  
 0.476
CBH22603.1
Putative drug resistance ABC-transporter, membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.476
CBH20680.1
Putative Nitroreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.453
ycnD
YcnD; Belongs to the flavin oxidoreductase frp family.
  
  
 0.453
CBH22576.1
Homologs of previously reported genes of unknown function.
  
  
 0.453
CBH21114.1
Sirohydrochlorin cobaltochelatase (fragment); Belongs to the precorrin methyltransferase family.
   
    0.451
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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