Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apt | deoD | CLOST_1306 | CLOST_0723 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine-nucleoside phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.914 |
| apt | guaA | CLOST_1306 | CLOST_0297 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | 0.993 |
| apt | guaD | CLOST_1306 | CLOST_0071 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Guanine deaminase. | 0.904 |
| apt | hpt | CLOST_1306 | CLOST_0628 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.921 |
| apt | hpt-2 | CLOST_1306 | CLOST_1919 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.921 |
| birA | guaA | CLOST_0946 | CLOST_0297 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | 0.756 |
| birA | guaD | CLOST_0946 | CLOST_0071 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Guanine deaminase. | 0.855 |
| birA | ribBA | CLOST_0946 | CLOST_0412 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.687 |
| deoD | apt | CLOST_0723 | CLOST_1306 | Purine-nucleoside phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.914 |
| deoD | guaD | CLOST_0723 | CLOST_0071 | Purine-nucleoside phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Guanine deaminase. | 0.902 |
| deoD | hpt | CLOST_0723 | CLOST_0628 | Purine-nucleoside phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Hypoxanthine phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.908 |
| deoD | hpt-2 | CLOST_0723 | CLOST_1919 | Purine-nucleoside phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Hypoxanthine phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.908 |
| deoD | tdk | CLOST_0723 | CLOST_2135 | Purine-nucleoside phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Thymidine kinase. | 0.922 |
| guaA | apt | CLOST_0297 | CLOST_1306 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.993 |
| guaA | birA | CLOST_0297 | CLOST_0946 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.756 |
| guaA | guaD | CLOST_0297 | CLOST_0071 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Guanine deaminase. | 0.661 |
| guaA | hpt | CLOST_0297 | CLOST_0628 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Hypoxanthine phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.961 |
| guaA | hpt-2 | CLOST_0297 | CLOST_1919 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Hypoxanthine phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.961 |
| guaA | ribBA | CLOST_0297 | CLOST_0412 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.802 |
| guaA | udk | CLOST_0297 | CLOST_1608 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Uridine/cytidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.423 |
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