STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20202.1Homologs of previously reported genes of unknown function. (272 aa)    
Predicted Functional Partners:
CBH20204.1
Exported protein of unknown function; No homology to any previously reported sequences.
 
     0.813
ssuC
SsuC.
 
     0.811
CBH20207.1
Homologs of previously reported genes of unknown function; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.789
CBH20208.1
Uroporphyrinogen decarboxylase family protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.743
CBH20205.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
      0.657
CBH20206.1
Putative CobW/P47K family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.648
CBH20817.1
Homologs of previously reported genes of unknown function.
  
     0.642
CBH20210.1
Homologs of previously reported genes of unknown function; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.632
CBH20212.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.557
CBH20211.1
Homologs of previously reported genes of unknown function.
 
     0.540
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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