STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20206.1Putative CobW/P47K family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (311 aa)    
Predicted Functional Partners:
CBH20207.1
Homologs of previously reported genes of unknown function; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.985
CBH20208.1
Uroporphyrinogen decarboxylase family protein; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.909
CBH20210.1
Homologs of previously reported genes of unknown function; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.874
mtbC
Dimethylamine corrinoid protein 2.
 
  
 0.853
CBH20212.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.845
CBH20222.1
Putative Methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.730
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
    
 
 0.727
CBH20211.1
Homologs of previously reported genes of unknown function.
 
     0.723
CBH20204.1
Exported protein of unknown function; No homology to any previously reported sequences.
 
     0.718
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
 
 0.717
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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