STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20297.1Putative Starch synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (397 aa)    
Predicted Functional Partners:
CBH20298.1
Homologs of previously reported genes of unknown function.
 
  
 0.937
GLC
1,4-alpha-glucan-branching enzyme (Glycogen-branching enzyme).
 
 
 0.875
CBH20296.1
Protein of unknown function; No homology to any previously reported sequences.
       0.723
CBH20489.1
Putative capsular polysaccharide biosynthesis glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.544
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.525
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.504
CBH20295.1
Homologs of previously reported genes of unknown function.
       0.487
CBH20495.1
Nucleotidyl transferase.
 
 
 0.480
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.473
CBH22459.1
NAD-dependent epimerase/dehydratase.
  
  
 0.464
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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