STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20323.1Protein of unknown function; No homology to any previously reported sequences. (449 aa)    
Predicted Functional Partners:
CBH20322.1
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.975
CBH20321.1
Putative Type IV pilus assembly protein PilM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.885
gspE
General secretory pathway component, cryptic; Function of strongly homologous gene; transporter.
  
 
 0.762
gspF
General secretory pathway component, cryptic; Function of strongly homologous gene; transporter.
   
 
 0.648
CBH20981.1
Putative Type II secretion system protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 
 0.579
CBH21356.1
Exported protein of unknown function; No homology to any previously reported sequences.
   
   0.544
CBH20319.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.511
CBH20320.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.467
CBH20317.1
Putative Fimbrial protein precursor (Pilin) (Strain K122-4); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.462
CBH20350.1
Putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.419
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.