STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20430.1Phage integrase; Belongs to the 'phage' integrase family. (376 aa)    
Predicted Functional Partners:
CBH20429.1
Transcriptional regulator (modular protein).
 
    0.949
CBH20428.1
Transcriptional regulator.
 
  
 0.877
CBH20433.1
Homologs of previously reported genes of unknown function.
 
     0.870
CBH20431.1
Homologs of previously reported genes of unknown function.
       0.783
CBH20436.1
Putative conjugative transposon mobilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.646
CBH20432.1
Putative phage DNA-polymerase or DNA-primase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.631
purD
Phosphoribosylamine--glycine ligase (modular protein); Belongs to the GARS family.
 
   
 0.454
CBH22471.1
Protein of unknown function; No homology to any previously reported sequences.
   
    0.451
CBH22661.1
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.447
CBH20434.1
Protein of unknown function; No homology to any previously reported sequences.
       0.426
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.