STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20522.1Proton-dependent oligopeptide transporter precursor. (459 aa)    
Predicted Functional Partners:
CBH22352.1
Homologs of previously reported genes of unknown function.
  
     0.760
CBH22349.1
Putative uncharacterized protein (PrdE); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.747
prdA
D-proline reductase proprotein PrdA; D-proline reductase catalyzes the reductive cleavage of a C-N bond in D-proline resulting in the formation of 5-aminovalerate. The alpha subunit has been shown to bind D-proline, presumably via the pyruvoyl group.
  
     0.745
CBH22350.1
Putative uncharacterized protein (PrdD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.738
CBH20523.1
Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase M24B family.
 
   
 0.734
pdrB
D-proline reductase gamma chain; D-proline reductase catalyzes the reductive cleavage of a C-N bond in D-proline resulting in the formation of 5-aminovalerate. The alpha subunit has been shown to bind D-proline, presumably via the pyruvoyl group.
  
     0.649
CBH22347.1
Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function.
  
     0.608
prdC
Electron transfer protein; Function of homologous gene experimentally demonstrated in an other organism; putative carrier.
  
     0.591
ywjB
YwjB.
   
    0.509
CBH21797.1
Homologs of previously reported genes of unknown function.
  
     0.448
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.