STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20552.1Homologs of previously reported genes of unknown function. (382 aa)    
Predicted Functional Partners:
CBH20553.1
Putative Secretion protein HlyD family protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.952
CBH20551.1
Membrane protein of unknown function; No homology to any previously reported sequences.
 
   
0.866
CBH20550.1
Putative Multiple antibiotic resistance protein marR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.831
CBH21753.1
ABC transporter related.
  
 0.543
CBH20846.1
Protein of unknown function; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.506
CBH20680.1
Putative Nitroreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.477
ycnD
YcnD; Belongs to the flavin oxidoreductase frp family.
  
  
 0.477
CBH22576.1
Homologs of previously reported genes of unknown function.
  
  
 0.477
CBH20155.1
Putative Abortive infection protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.476
CBH22604.1
ABC transporter related.
 
  
 0.472
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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