STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20578.1Homologs of previously reported genes of unknown function. (138 aa)    
Predicted Functional Partners:
eryC
Erythromycin biosynthesis sensory transduction protein eryC1; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.963
CBH22452.1
Acetyltransferase.
 
      0.900
CBH20579.1
Membrane protein, GtrA family.
 
     0.810
yfdH
Bactoprenol glucosyl transferase; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.
 
  
 0.730
CBH20575.1
Protein of unknown function; No homology to any previously reported sequences.
 
     0.711
CBH20576.1
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.665
CBH20572.1
Homologs of previously reported genes of unknown function.
  
  
 0.657
CBH20573.1
Putative Galactoside O-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.586
spsC
Spore coat biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.516
CBH20570.1
Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.491
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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