STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20629.1Homologs of previously reported genes of unknown function. (179 aa)    
Predicted Functional Partners:
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
    0.650
rsbV
Anti sigma b factor antagonist RsbV; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.614
rsbW
RsbW.
   
    0.571
sigB
RNA polymerase sigma-37 factor (sigma-B); Belongs to the sigma-70 factor family.
   
  
 0.568
yjbJ
Putative stress response protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the UPF0337 (CsbD) family.
 
  
 0.540
CBH20159.1
Substrate-binding region of ABC-type glycine betaine transport system precursor.
  
    0.535
yehZ
Putative transporter subunit: periplasmic-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
    0.535
CBH20342.1
Homologs of previously reported genes of unknown function.
  
    0.523
CBH20630.1
Putative Hemerythrin HHE cation binding region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.500
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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