STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20827.1Radical SAM domain protein. (448 aa)    
Predicted Functional Partners:
CBH20821.1
Homologs of previously reported genes of unknown function.
 
     0.944
CBH20822.1
Homologs of previously reported genes of unknown function.
 
     0.944
CBH20824.1
Putative Methyltransferase type 12; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    0.942
CBH20826.1
Radical SAM domain protein.
 
    
0.838
CBH20823.1
Putative Radical SAM domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    
0.832
CBH20820.1
Homologs of previously reported genes of unknown function.
 
    0.813
CBH20825.1
Radical SAM domain protein.
 
    
0.802
CBH21536.1
Homologs of previously reported genes of unknown function.
  
     0.645
ybaJ
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.587
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.564
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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