STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20840.1Renal dipeptidase. (324 aa)    
Predicted Functional Partners:
CBH20869.1
Putative glutamine amidotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      0.904
yvdE
Putative glutamine amidotransferase-like protein yvdE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      0.904
CBH22593.1
Putative glutamine amidotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      0.904
CBH20841.1
Transcriptional regulator, arac family.
       0.524
CBH22033.1
Homologs of previously reported genes of unknown function.
     
 0.475
cinA
CinA-like protein; Belongs to the CinA family.
       0.429
rny
Conserved protein of unknown function; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
       0.414
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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