STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20928.1YidE/YbjL duplication. (370 aa)    
Predicted Functional Partners:
CBH20788.1
C4-dicarboxylate anaerobic carrier (fragment).
  
     0.595
CBH20929.1
Peptidase.
       0.512
hutI
Putative imidazolonepropionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.452
CBH21134.1
Homologs of previously reported genes of unknown function.
  
     0.435
CBH20931.1
Homologs of previously reported genes of unknown function.
       0.416
CBH20926.1
Homologs of previously reported genes of unknown function.
       0.412
CBH20927.1
Nitrite and sulphite reductase 4Fe-4S region; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
       0.412
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.