Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBH20928.1 | CBH20929.1 | CLOST_0802 | CLOST_0803 | YidE/YbjL duplication. | Peptidase. | 0.512 |
CBH20928.1 | CBH20931.1 | CLOST_0802 | CLOST_0805 | YidE/YbjL duplication. | Homologs of previously reported genes of unknown function. | 0.416 |
CBH20928.1 | hutI | CLOST_0802 | CLOST_0804 | YidE/YbjL duplication. | Putative imidazolonepropionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.452 |
CBH20929.1 | CBH20928.1 | CLOST_0803 | CLOST_0802 | Peptidase. | YidE/YbjL duplication. | 0.512 |
CBH20929.1 | CBH20931.1 | CLOST_0803 | CLOST_0805 | Peptidase. | Homologs of previously reported genes of unknown function. | 0.615 |
CBH20929.1 | CBH21217.1 | CLOST_0803 | CLOST_1095 | Peptidase. | Phosphoribulokinase/uridine kinase. | 0.478 |
CBH20929.1 | CBH22033.1 | CLOST_0803 | CLOST_1913 | Peptidase. | Homologs of previously reported genes of unknown function. | 0.591 |
CBH20929.1 | CBH22247.1 | CLOST_0803 | CLOST_2127 | Peptidase. | CMP/dCMP deaminase, zinc-binding. | 0.507 |
CBH20929.1 | efp | CLOST_0803 | CLOST_1587 | Peptidase. | Elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.480 |
CBH20929.1 | guaB | CLOST_0803 | CLOST_0296 | Peptidase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.741 |
CBH20929.1 | hutI | CLOST_0803 | CLOST_0804 | Peptidase. | Putative imidazolonepropionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.674 |
CBH20929.1 | polA | CLOST_0803 | CLOST_1407 | Peptidase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.496 |
CBH20929.1 | topA | CLOST_0803 | CLOST_1498 | Peptidase. | TopA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally [...] | 0.464 |
CBH20931.1 | CBH20928.1 | CLOST_0805 | CLOST_0802 | Homologs of previously reported genes of unknown function. | YidE/YbjL duplication. | 0.416 |
CBH20931.1 | CBH20929.1 | CLOST_0805 | CLOST_0803 | Homologs of previously reported genes of unknown function. | Peptidase. | 0.615 |
CBH20931.1 | hutI | CLOST_0805 | CLOST_0804 | Homologs of previously reported genes of unknown function. | Putative imidazolonepropionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.701 |
CBH21217.1 | CBH20929.1 | CLOST_1095 | CLOST_0803 | Phosphoribulokinase/uridine kinase. | Peptidase. | 0.478 |
CBH21217.1 | CBH22033.1 | CLOST_1095 | CLOST_1913 | Phosphoribulokinase/uridine kinase. | Homologs of previously reported genes of unknown function. | 0.415 |
CBH21217.1 | guaB | CLOST_1095 | CLOST_0296 | Phosphoribulokinase/uridine kinase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.663 |
CBH21217.1 | polA | CLOST_1095 | CLOST_1407 | Phosphoribulokinase/uridine kinase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.454 |
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