STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutIPutative imidazolonepropionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (385 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase (Histidase).
 
  
 0.846
hutU
Urocanase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.826
CBH20931.1
Homologs of previously reported genes of unknown function.
       0.701
CBH20929.1
Peptidase.
       0.674
hutG
Formimidoylglutamase (Formiminoglutamase) (Formiminoglutamate hydrolase); Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
  
  
 0.653
CBH21441.1
Peptidase S9, prolyl oligopeptidase active site region:Acetyl xylan esterase.
 
     0.456
CBH20928.1
YidE/YbjL duplication.
       0.452
CBH22377.1
Penicillin-binding protein.
  
    0.400
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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