STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20948.1Putative radical SAM family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (459 aa)    
Predicted Functional Partners:
CBH20947.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.989
CBH20949.1
Putative SpeA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.913
CBH21609.1
Putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.776
CBH22674.1
Chromosomal replication initiator, DnaA.
  
     0.601
CBH20950.1
DNA topoisomerase.
 
     0.556
speA
Arginine decarboxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.529
NtpF
Archaeal/vacuolar-type H+-ATPase subunit H.
  
     0.471
CBH20611.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.456
yqfN
YqfN.
  
     0.412
ynbB
Putative C-S lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.409
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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