STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yiaIPutative hydrogenase, 4Fe-4S ferredoxin-type component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (185 aa)    
Predicted Functional Partners:
hydA
Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase).
   
 
 0.964
fdhA
Formate dehydrogenase alpha chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.953
hymC
Putative catalytic subunit of iron-only hydrogenase ([Fe] hydrogenase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.913
rnfB
Electron transport complex, RnfABCDGE type, B subunit precursor; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.861
CBH20962.1
Putative formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
 
   
 0.851
moeA
MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.802
fdhB
Formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier.
 
 
 
0.788
CBH20953.1
Aldehyde:ferredoxin oxidoreductase.
   
 
 0.755
CBH22033.1
Homologs of previously reported genes of unknown function.
  
  
 0.702
mobA
Putative molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
 
    0.676
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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