STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20973.1Homologs of previously reported genes of unknown function. (86 aa)    
Predicted Functional Partners:
hydF
Iron-only hydrogenase maturation protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.963
hydE
Iron-only hydrogenase maturation protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.956
hydG
Fe-hydrogenase assembly protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.952
yvrB
Putative iron transport system permease protein YvrB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.782
CBH22577.1
Iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.782
fepD
Iron-enterobactin transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.782
yvrC
Putative iron transport system substrate-binding protein YvrC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.754
CBH22579.1
Iron compound ABC transporter, iron compound-binding protein.
  
 
 0.754
hydA
Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase).
 
     0.550
CBH22177.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.463
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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