STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH20982.1Homologs of previously reported genes of unknown function. (105 aa)    
Predicted Functional Partners:
CBH20987.1
Putative Transglutaminase-like enzyme, cysteine protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.927
pilT
Twitching mobility protein.
 
     0.872
CBH20981.1
Putative Type II secretion system protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.853
CBH20983.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.790
CBH20985.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.787
CBH20996.1
Putative Transglutaminase-like enzyme, cysteine protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.779
CBH20685.1
Protein of unknown function; No homology to any previously reported sequences.
 
     0.766
CBH20984.1
Protein of unknown function; No homology to any previously reported sequences.
       0.748
CBH20784.1
Homologs of previously reported genes of unknown function.
  
     0.579
CBH20980.1
Putative Metal-dependent phosphohydrolase, HD region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.553
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.