STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21126.1Inner-membrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family. (431 aa)    
Predicted Functional Partners:
CBH21128.1
ABC transporter related.
 
 
 0.972
CBH21129.1
Homologs of previously reported genes of unknown function.
 
  
 0.916
CBH21127.1
Inner-membrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.851
rbsD
Putative cytoplasmic sugar-binding protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.566
CBH21125.1
Protein of unknown function; No homology to any previously reported sequences.
       0.556
CBH20664.1
Periplasmic binding protein/LacI transcriptional regulator.
  
 
 0.506
CBH20811.1
Methylthioribose-binding protein.
  
 
 0.506
CBH20899.1
ABC-type sugar transport system periplasmic component-like protein precursor.
  
 
 0.506
rbsB
D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.506
xylG
Fused D-xylose transporter subunits of ABC superfamily: ATP-binding components; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.503
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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