STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21166.1Transcriptional regulator, XRE family. (328 aa)    
Predicted Functional Partners:
CBH21167.1
Beta-lactamase domain protein.
  
    0.749
CBH21168.1
Protein of unknown function; No homology to any previously reported sequences.
       0.626
CBH21169.1
Putative helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.574
CBH21170.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.515
CBH21165.1
Putative metal dependent phosphohydrolase (HD domain protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.487
CBH20339.1
Homologs of previously reported genes of unknown function.
  
     0.485
CBH20533.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.437
CBH21533.1
Aspartokinase; Belongs to the aspartokinase family.
  
     0.415
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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