Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBH21122.1 | ktrC | CLOST_0999 | CLOST_1140 | Uroporphyrinogen III synthase/methyltransferase. | NAD-binding site. | 0.586 |
| CBH21122.1 | purD | CLOST_0999 | CLOST_0339 | Uroporphyrinogen III synthase/methyltransferase. | Phosphoribosylamine--glycine ligase (modular protein); Belongs to the GARS family. | 0.666 |
| CBH21122.1 | selA | CLOST_0999 | CLOST_1358 | Uroporphyrinogen III synthase/methyltransferase. | Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. | 0.489 |
| CBH21261.1 | CBH21313.1 | CLOST_1141 | CLOST_1193 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.404 |
| CBH21261.1 | ktrB | CLOST_1141 | CLOST_1139 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Potassium transporter ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.782 |
| CBH21261.1 | ktrC | CLOST_1141 | CLOST_1140 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | NAD-binding site. | 0.806 |
| CBH21261.1 | pheT | CLOST_1141 | CLOST_1143 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Phenylalanine tRNA synthetase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.759 |
| CBH21313.1 | CBH21261.1 | CLOST_1193 | CLOST_1141 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.404 |
| CBH21313.1 | guaB | CLOST_1193 | CLOST_0296 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.505 |
| CBH21313.1 | ktrC | CLOST_1193 | CLOST_1140 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | NAD-binding site. | 0.587 |
| CBH21313.1 | pheT | CLOST_1193 | CLOST_1143 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Phenylalanine tRNA synthetase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.555 |
| CBH21313.1 | purD | CLOST_1193 | CLOST_0339 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Phosphoribosylamine--glycine ligase (modular protein); Belongs to the GARS family. | 0.468 |
| CBH21313.1 | rsmB | CLOST_1193 | CLOST_1852 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.596 |
| CBH22033.1 | guaB | CLOST_1913 | CLOST_0296 | Homologs of previously reported genes of unknown function. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.617 |
| CBH22033.1 | ktrB | CLOST_1913 | CLOST_1139 | Homologs of previously reported genes of unknown function. | Potassium transporter ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.478 |
| CBH22033.1 | ktrC | CLOST_1913 | CLOST_1140 | Homologs of previously reported genes of unknown function. | NAD-binding site. | 0.650 |
| CBH22033.1 | rsmB | CLOST_1913 | CLOST_1852 | Homologs of previously reported genes of unknown function. | RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.425 |
| guaB | CBH21313.1 | CLOST_0296 | CLOST_1193 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.505 |
| guaB | CBH22033.1 | CLOST_0296 | CLOST_1913 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Homologs of previously reported genes of unknown function. | 0.617 |
| guaB | ktrB | CLOST_0296 | CLOST_1139 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Potassium transporter ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.560 |
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