STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21356.1Exported protein of unknown function; No homology to any previously reported sequences. (105 aa)    
Predicted Functional Partners:
CBH21632.1
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.895
lexA
LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
       0.559
CBH20323.1
Protein of unknown function; No homology to any previously reported sequences.
   
   0.544
gspE
General secretory pathway component, cryptic; Function of strongly homologous gene; transporter.
    
   0.542
CBH20321.1
Putative Type IV pilus assembly protein PilM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
   0.542
CBH20322.1
Protein of unknown function; No homology to any previously reported sequences.
    
   0.542
CBH20331.1
Putative NADPH-dependent FMN reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.541
CBH22066.1
Homologs of previously reported genes of unknown function.
  
  
 0.507
CBH20286.1
General stress protein 20U; Belongs to the Dps family.
   
  
 0.475
gspF
General secretory pathway component, cryptic; Function of strongly homologous gene; transporter.
    
   0.465
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.