STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21458.1Homologs of previously reported genes of unknown function. (286 aa)    
Predicted Functional Partners:
CBH21459.1
Putative pyrophosphokinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.973
CBH21457.1
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.929
CBH21456.1
Homologs of previously reported genes of unknown function.
 
     0.927
CBH21455.1
Homologs of previously reported genes of unknown function.
 
     0.924
CBH21609.1
Putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.786
CBH21706.1
Homologs of previously reported genes of unknown function.
  
     0.675
CBH21453.1
Putative Tyrosine recombinase xerD-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family.
  
    0.667
nudF
ADP-ribose pyrophosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.653
CBH20765.1
RNA polymerase sigma-54 factor (fragment).
  
     0.651
deoA
Thymidine phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.598
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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