STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC-2Alkanesulfonate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (251 aa)    
Predicted Functional Partners:
CBH21549.1
Putative ABC transporter substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.970
nrtC
Taurine ABC transporter, ATP-binding protein.
  
 0.961
CBH20204.1
Exported protein of unknown function; No homology to any previously reported sequences.
 
  
 0.838
CBH21550.1
Protein of unknown function; No homology to any previously reported sequences.
 
     0.824
CBH22395.1
ABC transporter, ATP-binding protein.
  
 0.808
CBH22396.1
Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.767
CBH21551.1
Putative Ribonuclease III; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.713
rffA
TDP-4-oxo-6-deoxy-D-glucose transaminase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.713
CBH22397.1
Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.696
ssuC
SsuC.
 
    
0.684
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.