STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21549.1Putative ABC transporter substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (325 aa)    
Predicted Functional Partners:
ssuC-2
Alkanesulfonate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.970
CBH21550.1
Protein of unknown function; No homology to any previously reported sequences.
 
     0.933
nrtC
Taurine ABC transporter, ATP-binding protein.
 
  
 0.919
CBH21553.1
Homologs of previously reported genes of unknown function; Belongs to the sulfur carrier protein TusA family.
 
    0.885
CBH21551.1
Putative Ribonuclease III; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.783
rdlA
Rhodanese.
 
  
 0.778
rffA
TDP-4-oxo-6-deoxy-D-glucose transaminase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.763
CBH21555.1
Homologs of previously reported genes of unknown function.
  
     0.761
CBH21557.1
Homologs of previously reported genes of unknown function.
  
     0.737
CBH22396.1
Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.675
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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