STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21609.1Putative membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (722 aa)    
Predicted Functional Partners:
CBH21606.1
Homologs of previously reported genes of unknown function; Belongs to the UPF0473 family.
 
     0.825
yrzL
YrzL; Belongs to the UPF0297 family.
       0.800
CBH21457.1
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.788
CBH21608.1
Aldo/keto reductase.
       0.788
CBH21459.1
Putative pyrophosphokinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.787
CBH21458.1
Homologs of previously reported genes of unknown function.
 
     0.786
yrrK
Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.778
CBH20948.1
Putative radical SAM family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.776
CBH21455.1
Homologs of previously reported genes of unknown function.
  
     0.775
CBH21456.1
Homologs of previously reported genes of unknown function.
  
     0.775
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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