STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21724.1Cation-transporting ATPase, E1-E2 family. (882 aa)    
Predicted Functional Partners:
CBH21719.1
Homologs of previously reported genes of unknown function.
  
 
 0.624
CBH22105.1
Mg(2+) transport ATPase protein C (fragment).
  
 
 0.556
CBH21723.1
Ornithine cyclodeaminase family protein.
       0.462
yecS
Putative transporter subunit: permease component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
    0.462
aapP
Amino-acid transporter subunit; Function of strongly homologous gene; transporter.
  
  
 0.449
CBH21727.1
Amino acid abc transporter, amino acid-binding protein.
  
  
 0.405
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
Server load: low (28%) [HD]